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Algorithms in Bioinformatics : Theory and Implementation

Explores a comprehensive and insightful treatment of the practical application of bioinformatic algorithms in a variety of fields. Delivers a fulsome treatment of some of the main algorithms used to explain biological functions and relationships. It introduces readers to the art of algorithms in a practical manner which is linked with biological theory and interpretation. The book covers many key areas of bioinformatics, including global and local sequence alignment, forced alignment, detection of motifs, Sequence logos, Markov chains or information entropy. Other novel approaches are also described, such as Self-Sequence alignment, Objective Digital Stains (ODSs) or Spectral Forecast and the Discrete Probability Detector (DPD) algorithm. Readers will also benefit from the inclusion of: A detailed presentation of new methods, such as Self-sequence alignment, Objective Digital Stains and Spectral Forecast ; A treatment of sequence alignment, including local sequence alignment, global sequence alignment and forced sequence alignment with full implementations ; Discussions of position-specific weight matrices, including the count, weight, relative frequencies, and log-likelihoods matrices ; A detailed presentation of the methods related to Markov Chains as well as a description of their implementation in Bioinformatics and adjacent fields ; An examination of information and entropy, including sequence logos and explanations related to their meaning ; A chapter on philosophical transactions that allows the reader a broader view of the prediction process ; Extensive worked examples with detailed case studies that point out the meaning of different results

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Algorithms for Sensor and Ad Hoc Networks : Advanced Lectures

Thousands of mini computers (comparable to a stick of chewing gum in size), equipped with sensors, are deployed in some terrain or other. After activation the sensors form a self-organized network and provide data, for example about a forthcoming earthquake. The trend towards wireless communication increasingly affects electronic devices in almost every sphere of life. Conventional wireless networks rely on infrastructure such as base stations; mobile devices interact with these base stations in a client/server fashion. In contrast, current research is focusing on networks that are completely unstructured, but are nevertheless able to communicate (via several hops) with each other, despite the low coverage of their antennas. Such systems are called sensor or ad hoc networks, depending on the point of view and the application. Wireless ad hoc and sensor networks have gained an incredible research momentum. Computer scientists and engineers of all flavors are embracing the area. Sensor networks have been adopted by researchers in many fields: from hardware technology to operating systems, from antenna design to databases, from information theory to networking, from graph theory to computational geometry.

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Algorithms for a New World : When Big Data and Mathematical Models Meet

Algorithms, artificial neural networks, and machine learning help us discover the opportunities and pitfalls of a world governed by mathematics and artificial intelligence.

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Algorithms and Models for the Web-Graph ; 4th International Workshop, WAW 2006, Banff, Canada, November 30 - December 1, 2006. Revised Papers

his book constitutes the revised papers of the Fourth International Workshop on Algorithms and Models for the Web-Graph, WAW 2006, held in Banff, Canada, November 30 - December 1, 2006.

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Algorithms and data structures for massive datasets

Learn: Probabilistic sketching data structures for practical problems Choosing the right database engine for your application Evaluating and designing efficient on-disk data structures and algorithms Understanding the algorithmic trade-offs involved in massive-scale systems Deriving basic statistics from streaming data Correctly sampling streaming data Computing percentiles with limited space resources Algorithms and Data Structures for Massive Datasets reveals a toolbox of new methods that are perfect for handling modern big data applications. You'll explore the novel data structures and algorithms that underpin Google, Facebook, and other enterprise applications that work with truly massive amounts of data. These effective techniques can be applied to any discipline, from finance to text analysis. Graphics, illustrations, and hands-on industry examples make complex ideas practical to implement in your projects--and there's no mathematical proofs to puzzle over. Work through this one-of-a-kind guide, and you'll find the sweet spot of saving space without sacrificing your data's accuracy. About the Technology Standard algorithms and data structures may become slow--or fail altogether--when applied to large distributed datasets. Choosing algorithms designed for big data saves time, increases accuracy, and reduces processing cost.

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Algorithms – ESA 2005 ; 13th Annual European Symposium, Palma de Mallorca, Spain, October 3-6, 2005, Proceedings

This volume contains the 75 contributed papers and the abstracts of the threeinvited lectures presented at the 13th Annual European Symposium on Algo-rithms (ESA 2005), held in Spain, 2005. respectively.Papers were solicited in all areas of algorithmic research, including but notlimited to algorithmic aspects of networks, approximation and on-line algo-rithms, computational biology, computational geometry, computational financeand algorithmic game theory, data structures, database and information re-trieval, external memory algorithms, graph algorithms, graph drawing, machinelearning, mobile computing, pattern matching and data compression, quantumcomputing, and randomized algorithms. The algorithms could be sequential,distributed, or parallel. Submissions were especially encouraged in the area ofmathematical programming and operations research, including combinatorialoptimization, integer programming, polyhedral combinatorics, and semidefiniteprogramming.Each extended abstract was submitted to one of the two tracks.

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Algorithmic methods for railway optimization ; International Dagstuhl workshop, railway optimization 2004, Dagstuhl Castle, Germany, June 20-25, 2004, Bergen, Norway, September 16-17, 2004, Revised Selected Papers

This state-of-the-art survey features papers that were selected after an open call following the International Dagstuhl Seminar on Algorithmic Methods for Railway Optimization. The second part of the volume constitutes the refereed proceedings of the 4th International Workshop on Algorithmic Methods and Models for Optimization of Railways.

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Algorithmic Learning in a Random World

This new monograph integrates mathematical theory and revealing experimental work. It demonstrates mathematically the validity of the reliability claimed by conformal predictors when they are applied to independent and identically distributed data, and it confirms experimentally that the accuracy is sufficient for many practical problems. Later chapters generalize these results to models called repetitive structures, which originate in the algorithmic theory of randomness and statistical physics. The approach is flexible enough to incorporate most existing methods of machine learning, including newer methods such as boosting and support vector machines and older methods such as nearest neighbors and the bootstrap.

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Algebra, Meaning, and Computation ; Essays dedicated to Joseph A. Goguen on the Occasion of His 65th Birthday

This Festschrift volume - published to honor Joseph Goguen on his 65th Birthday on June 28, 2006 - includes 32 refereed papers by leading researchers in the different areas spanned by Joseph Goguen's work. The papers address a broad variety of topics from meaning, meta-logic, specification and composition, behavior and formal languages, as well as models, deduction, and computation.The papers were presented at a Symposium in San Diego, California, USA in June 2006.

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Ajax in Oracle JDeveloper

The book covers web search and RSS Feed with Ajax as well as form validation with Ajax frameworks for Java, JSP, JSF, and PHP. It discusses using Ajax in Oracle JDeveloper and is IDE based. JDeveloper has the following advantages over Eclipse IDE.

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AI-Enabled Threat Detection and Security Analysis for Industrial IoT

Provides the state-of-the-art development on security and privacy for cyber-physical systems (CPS) and industrial Internet of Things (IIoT). More specifically, this book discusses the security challenges in CPS and IIoT systems as well as how Artificial Intelligence (AI) and Machine Learning (ML) can be used to address these challenges. Furthermore, this book proposes various defence strategies, including intelligent cyber-attack and anomaly detection algorithms for different IIoT applications.

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AI in learning : Designing the future

AI (artificial intelligence) is predicted to radically change teaching and learning in both schools and industry causing radical disruption of work. AI can support well-being initiatives and lifelong learning but educational institutions and companies need to take the changing technology into account. Moving towards AI supported by digital tools requires a dramatic shift in the concept of learning, expertise and the businesses built off of it. Based on the latest research on AI and how it is changing learning and education, this book will focus on the enormous opportunities to expand educational settings with AI for learning in and beyond the traditional classroom. This book also introduces ethical challenges related to learning and education, while connecting human learning and machine learning.

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AI in drug discovery

Constitutes the refereed proceedings of the First international workshop on ai in Drug Discovery, AIDD 2024, held as a part of the 33rd International Conference on Artificial Neural Networks, ICANN 2024, in Lugano, Switzerland, on September 19, 2024. These papers focus on various aspects of the rapidly evolving field of Artificial Intelligence (AI)-driven drug discovery in chemistry, including Big Data and advanced Machine Learning, eXplainable AI (XAI), Chemoinformatics, Use of deep learning to predict molecular properties, Modeling and prediction of chemical reaction data and Generative models.

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AI For Emerging Verticals : Human-robot computing, sensing and networking

Artificial intelligence (AI) and machine learning (ML) will play a major role. By adopting AI software and services, businesses can create predictive strategies, enhance their capabilities, better interact with customers, and streamline their business processes. Explores novel concepts and cutting-edge research and developments towards designing these fully automated advanced digital systems. Fostered by technological advances in artificial intelligence and machine learning, such systems potentially have a wide range of applications in robotics, human computing, sensing and networking. The chapters focus on models and theoretical approaches to guarantee automation in large multi-scale implementations of AI and ML systems; protocol designs to ensure AI systems meet key requirements for future services such as latency; and optimisation algorithms to leverage the trusted distributed and efficient complex architectures.

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AI and UX : Why artificial intelligence needs user experience

Great effort has been put forth to continuously make AI “smarter.” But, will smarter always equal more successful AI? It is not just about getting a product to market, but about getting the product into a user’s hands in a form that will be embraced. This demands examining the product from the perspective of the user. Authors Gavin Lew and Robert Schumacher have written AI and UX to examine just how product managers and designers can best strike this balance. From exploring the history of the parallel journeys of AI and UX, to investigating past product examples and failures, to practical expert knowledge on how to best execute a positive user experience, AI and UX examines all angles of how AI can best be developed within a UX framework.

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AI and IoT for smart city applications

Provides a valuable combination of relevant research works on developing smart city ecosystem from the artificial intelligence (AI) and Internet of things (IoT) perspective. The technical research works presented here are focused on a number of aspects of smart cities: smart mobility, smart living, smart environment, smart citizens, smart government, and smart waste management systems as well as related technologies and concepts. This edited book offers critical insight to the key underlying research themes within smart cities, highlighting the limitations of current developments and potential future directions.

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Agile software engineering

This textbook presents the crucial issues in software engineering using the agile approach to software development - one of the mainstream paradigms for the management of software projects and one that is being applied more and more extensively.

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Agile processes in software engineering and extreme programming : XP 2022 workshops, Copenhagen, Denmark, June 13-17, 2022 and XP 2023 workshops, Amsterdam, the Netherlands, June 13-16, 2023 : revised selected papers

Book constitutes papers from the research workshops presented at XP 2022 and XP 2023, respectively the 23rd and 24th International Conferences on Agile Software Development, held on June 13-17, 2022 at the IT University of Copenhagen, Denmark and June 13-16, 2023 in Amsterdam, Netherlands.

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Agile Development with the ICONIX Process : People, Process, and Pragmatism

Describes how to apply ICONIX Process (a minimal, use case-driven modeling process) in an agile software project. It's full of practical advice for avoiding common agile pitfalls. Further, the book defines a core agile subset so those of you who want to get agile need not spend years learning to do it. Instead, you can simply read this book and apply the core subset of techniques. The book follows a real-life .NET/C# project from inception and UML modeling, to working code through several iterations. You can then go on-line to compare the finished product with the initial set of use cases. The book also introduces several extensions to the core ICONIX Process, including combining test-driven development (TDD) with up-front design to maximize both approaches (with examples using Java and JUnit). And the book incorporates persona analysis to drive the projects goals and reduce requirements churn.

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Agent-based Supply Network Event Management

Supply Chain Event Management (SCEM)" is one of the major topics in application-oriented Supply Chain Management. However, many solutions lack conceptual precision and currently available client-server SCEM-systems are ill-suited for complex supply networks in today's business environment,In this book a thorough analysis of the event management problem domain is the starting point to develop a generic agent-based approach to Supply Network Event Management. The concept is illustrated with prototypical implementations and assessed in a multi-dimensional evaluation of potential benefits. The main focus lies on practical issues of event management (e.g. semantic interoperability) and economic benefits to be achieved with agent technology in this state-of-the-art problem domain.

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