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XML for Bioinformatics

Provides a solid introduction to the emerging use of XML in the field of bioinformatics. It assumes no prior knowledge of XML, and illustrates all core concepts with specific bioinformatics examples and case studies. Core XML concepts include: fundamentals of XML, Document Type Definitions (DTDs), XML Namespaces, XML Schema, XML parsing in Perl and Java, web services and SOAP. Examples and case studies are drawn from a wide range of bioinformatics applications, including the Bioinformatic Sequence Markup Language (BSML), NCBI E-Fetch, the Distributed Annotation System (DAS), and the National Cancer Institute Cancer Bioinformatics Infrastructure Objects (caBIO) project.

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Web technologies research and development - APWeb 2005 ; 7th Asia-Pacific Web Conference, Shanghai, China, March 29 - April 1, 2005, Proceedings

APWeb is an international conference series on WWW technologies and is the primary forum for researchers and practitioners from both academia and industry to exchange knowledge on WWW-related technologies and new advanced applications. After a thorough review process for each submission by the Program Committee members and expert reviewers recommended by PC members, APWeb 2005 accepted 71 regular research papers (acceptance ratio 16.9%) and 22 short papers (acceptance ratio 5.2%). This volume also includes 6 keynote papers and 11 invited demo papers.

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Web Reasoning and Rule Systems ; 1st International Conference, RR 2007, Innsbruck, Austria, June 7-8, 2007, Proceedings

It address all current topics in Web reasoning and rule systems, including acquisition of rules and ontologies by knowledge extraction, design and analysis of reasoning languages, reasoning with constraints, rule languages and systems, semantic Web services modeling and applications.

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Web Information Systems Engineering - WISE 2005 ; 6th International Conference on Web Information Systems Engineering, New York, NY, USA, November 20-22, 2005, Proceedings

This book constitutes the proceedings of the 6th International Conference on Web Information Systems Engineering, WISE 2005, held in New York, NY, USA, in November 2005. The papers are organized in topical sections on Web mining, Web information retrieval, metadata management, ontology and semantic Web, XML, Web service method, Web service structure, collaborative methodology, P2P, ubiquitous and mobile, document retrieval applications, Web services and e-commerce, recommendation and Web information extraction, P2P, grid and distributed management, and advanced issues.

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Web Information Systems - WISE 2006 ; 7th International Conference in Web Information Systems Engineering, Wuhan, China, October 23-26, 2006, Proceedings

This book constitutes the proceedings of the 7th International Conference on Web Information Systems Engineering, WISE 2006, held in Wuhan, China in October 2006. The 37 revised full papers and 17 revised short papers presented together with three invited lectures were carefully reviewed and selected from 183 submissions.

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The Semantic Web - ISWC 2002 ; 1st International Semantic Web Conference, Sardinia, Italy, June 9-12, 2002, Proceedings

PrefaceThis volume contains the papers presented at the First International Seman-tic Web Conference (ISWC 2002) held in Sardinia, Italy, 9–12th June, 2002.The conference followed on from the highly successful Semantic Web WorkingSymposium held at Stanford University, USA in 2001.A total of 133 papers were submitted to ISWC 2002, comprising 95 researchpapers, 22 position papers, and 16 system description papers. Each submissionwas evaluated by at least two referees, mainly members of the Program Commit-tee. This resulted in the selection of 40 papers for presentation at the conferenceand publication in this volume. Of these, 27 are research papers, 6 are positionpapers, and 7 are system description papers.

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Survey of Text Mining II : Clustering, Classification, and Retrieval

Continues to survey the evolving field of text mining - the application of techniques of machine learning, in conjunction with natural language processing, information extraction and algebraic/mathematical approaches, to computational information retrieval. Numerous diverse issues are addressed, ranging from the development of new learning approaches to novel document clustering algorithms, collectively spanning several major topic areas in text mining.

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String processing and information retrieval ; Vol. 3772 ; 12th International Conference, SPIRE 2005, Buenos Aires, Argentina, November 2-4, 2005, Proceedings

Constitutes the refereed proceedings of the 12th International Conference on String Processing and Information Retrieval, SPIRE 2005, held in Buenos Aires, Argentina in November 2005. The 27 revised full papers and 17 revised short papers presented were carefully reviewed and selected from 102 submissions. The papers address current issues in all aspects of string processing, information retrieval, pattern matching, computational biology, semi-structured data, and related applications

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String Processing and Information Retrieva ; 14th International Symposium, SPIRE 2007 Santiago, Chile, October 29-31, 2007 Proceedings

Coverage in the 27 revised full papers includes dictionary algorithms, text searching, pattern matching, text compression, text mining, natural language processing, sequence driven protein structure prediction, XML, SGML, information retrieval from semi-structured data, text mining and generation of structured data from text.

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Stream Data Management

Researchers in data management have recently recognized the importance of a new class of data-intensive applications that requires managing data streams, i.e., data composed of continuous, real-time sequence of items. Streaming applications pose new and interesting challenges for data management systems. Such application domains require queries to be evaluated continuously as opposed to the one time evaluation of a query for traditional applications. Streaming data sets grow continuously and queries must be evaluated on such unbounded data sets. These, as well as other challenges, require a major rethink of almost all aspects of traditional database management systems to support streaming applications. Stream Data Management comprises eight invited chapters by researchers active in stream data management. The collected chapters provide exposition of algorithms, languages, as well as systems proposed and implemented for managing streaming data.

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Service-Oriented Computing - ICSOC 2006 ; 4th International Conference, Chicago, IL, USA, December 4-7, Proceedings

This volume contains the proceedings of the 4th International Conference on Service- Oriented Computing (ICSOC 2006), which took place in Chicago, USA, 2006. Service-oriented computing brings together ideas and technologies from many d- ferent fields in an evolutionary manner to address research challenges such as service composition, discovery, integration, monitoring and management of services, service quality and security, methodologies for supporting service development, governances in their evolution, as well as their overall life-cycle management.

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Semantic Web and Peer-to-Peer : Decentralized Management and Exchange of Knowledge and Information

Staab and Stuckenschmidt structured the selected contributions into four parts: Part I, "Data Storage and Access", prepares the semantic foundation, i.e. data modelling and querying in a flexible and yet scalable manner. These foundations allow for dealing with the organization of information at the individual peers. Part II, "Querying the Network", considers the routing of queries, as well as continuous queries and personalized queries under the conditions of the permanently changing topological structure of a peer-to-peer network. Part III, "Semantic Integration", deals with the mapping of heterogeneous data representations. Finally Part IV, "Methodology and Systems", reports experiences from case studies and sample applications. The overall result is a state-of-the-art description of the potential of Semantic Web and peer-to-peer technologies for information sharing and knowledge management when applied jointly.

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Semantic web and databases ; 2nd International Workshop, SWDB 2004, Toronto, Canada, August 29-30, 2004, Revised Selected Papers

Among the topics addressed are data semantics, semantic Web services, service-oriented computing, workflow composition, XML semantics, relational tables, ontologies, semantic Web algebra, heterogeneous data sources, context mediation, OWL, ontology engineering, data integration, semantic Web queries, database queries, and peer-to-peer warehouses.

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Secure Data Management in Decentralized Systems

New data services are emerging every day, which also brings new challenges to protect data security. The internet and the web offer means for collecting and sharing data with unprecedented flexibility and convenience. Secure Data Management in Decentralized Systems identifies and addresses these new challenges. This volume presents a wide range of active areas, closely related to database security by distinguished leaders within this field. Solutions are included.

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Secure Data Management ; Vol. 4165 ; Third VLDB Workshop, SDM 2006, Seoul, Korea, September 10-11, 2006, Proceedings

The use of new technologies has brought some privacy concerns. It becomes simpler to collect, store, and search personal information and endanger people’s privacy. Therefore, research in the area of secure data management is of growing imp- tance, attracting the attention of both the data management and security - search communities. The interesting problems range from traditional ones such asaccesscontrol(withallvariations,likerole-basedand/orcontext-aware),da- base security, operations on encrypted data, and privacy preserving data mining to cryptographic protocols. The call for papers attracted 33 papers both from universities and ind- try. The program committee selected 13 research papers for presentation at the workshop. These papers are also collected in this volume, which we hope will serve you as useful research and reference material.

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Secure Data Management ; 4th VLDB Workshop, SDM 2007, Vienna, Austria, September 23-24, 2007, Proceedings

Although a number of cryptography and security techniques have been around for quite some time, emerging technologies, such as ubiquitous computing and ambient intelligence that exploit increasingly interconnected networks, mobility and personalization, put new requirements on privacy and security with respect to data management. As data are accessible anytime anywhere, according to these new concepts, it becomes much easier to get unauthorized data access. As another consequence, the use of new technologies has brought some privacy concerns. It becomes simpler to collect, store, and search personal information and endanger people’s privacy. Therefore, research in the area of secure data management is of growing importance, attracting the attention of both the data managementand securityresearchcommunities.

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Research and Advanced Technology for Digital Libraries Vol. 4172 ; 10th European Conference, EDCL 2006, Alicante Spain, September 17-22, 2006, Proceedings

This book constitutes the refereed proceedings of the proceedings of the 10thEuropean Conference onDigital Libraries (ECDL 2006). Over the last ten years, ECDL has created a stronginterdisciplinary community of researchers and practitioners in the field of digitallibraries, and has formed a substantial body of scholarly publications containedin the conference proceedings.

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Research and advanced technology for digital libraries ; Vol. 3652 ; 9th European Conference, ECDL 2005, Vienna, Austria, September 18-23, 2005, Proceedings

This book constitutes the refereed proceedings of the 9th European Conference on Research and Advanced Technology for Digital Libraries, ECDL 2005, held in Vienna, Austria in September 2005. The 41 revised full papers presented together with 2 panel papers and 30 revised poster papers were carefully reviewed and selected from a total of 162 submissions. The papers are organized in topical sections on digital library models and architectures, multimedia and hypermedia digital libraries, XML, building digital libraries, user studies, digital preservation, metadata, digital libraries and e-learning, text classification in digital libraries, searching, and text digital libraries.

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Reasoning Web ; Vol. 3564 : 1st International Summer School 2005, Msida, Malta, July 25-29, 2005, Revised Lectures

Contains the tutorial papers of the Summer School “Reasoning Web, ”July 25–29, 2005. The main idea of the Semantic Web is to enrich Web data with meta-data carrying a “meaning” of the data and allowing Web-based systems to reason about data (and meta-data). The meta-data used in Semantic Web applications is usually linked to a conceptualization of the application domain shared by di?erent applications. Such a conceptualization is called an ontology and species classes of objects and relations between them. Ontologies are defined by ontology languages, based on logic and supporting formal reasoning. Just as the current Web is inherently heterogeneous in data formats and data semantics, the Semantic Web will be inherently heterogeneous in its reasoning forms. - deed, any single form of reasoning turns out to be insu?cient in the Semantic Web.

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Reasoning Web ; 3rd International Summer School 2007, Dresden, Germany, September 3-7, 2007, Tutorial Lectures

This book contains a collection of thoroughly revised tutorial papers based on lectures given by leading researchers at the Second International Summer School on the Reasoning Web in Dresden, Germany, September 2007.

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