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Database systems for advanced applications ; Vol. 3453 ; 10th international conference, DASFAA 2005, Beijing, China, April 17-20, 2005, Proceedings
Data Stream Mining and Resource Adaptive Computation.- Purpose Based Access Control for Privacy Protection in Database Systems.- Complex Networks and Network Data Mining.- Bioinformatics.- Indexing DNA Sequences Using q-Grams.- PADS: Protein Structure Alignment Using Directional Shape Signatures.- LinkageTracker: A Discriminative Pattern Tracking Approach to Linkage Disequilibrium Mapping.- Watermarking and Encryption.- Query Optimization in Encrypted Database Systems.- Watermarking Spatial Trajectory Database.- Effective Approaches for Watermarking XML Data.- XML Query Processing.- A Unifying Framework for Merging and Evaluating XML Information.- Efficient Evaluation of Partial Match Queries for XML Documents Using Information Retrieval Techniques.- PathStack: A Holistic Path Join Algorithm for Path Query with Not-Predicates on XML Data.- XML Coding and Metadata Management.- An Improved Prefix Labeling Scheme: A Binary String Approach for Dynamic Ordered XML.- Efficiently Coding and Indexing XML Document.- XQuery-Based TV-Anytime Metadata Management.- Data Mining.- Effective Database Transformation and Efficient Support Computation for Mining Sequential Patterns.
Data Mining in Bioinformatics
8. 1. 1 Protein Subcellular Location The life sciences have entered the post-genome era where the focus of biological research has shifted from genome sequences to protein functionality. Withwhole-genomedraftsofmouseandhumaninhand,scientistsareputting more and more e?ort into obtaining information about the entire proteome in a given cell type. The properties of a protein include its amino acid sequences, its expression levels under various developmental stages and in di?erent tissues, its3Dstructure and activesites,its functionalandstructural binding partners, and its subcellular location. Protein subcellular location is important for understanding protein function inside the cell. For example, the observation that the product of a gene is localized in mitochondria will support the hypothesis that this protein or gene is involved in energy metabolism. Proteins localized in the cytoskeleton are probably involved in intracellular tra?cking and support.
Data Mining and Bioinformatics ; 1st International Workshop, VDMB 2006, Seoul, Korea, September 11, 2006, Revised Selected Papers
This volume contains the papers presented at the inaugural workshop on Data Mining and Bioinformatics at the 32nd International Conference on Very Large Data Bases (VLDB). The purpose of this workshop was to begin bringing - gether researchersfrom database, data mining, and bioinformatics areas to help leverage respective successes in each to the others.
Cooperative Information Agents XI ; Matthias Klusch, Koen V. Hindriks, Mike P. Papazoglou, Leon Sterling
In today’s world of ubiquitously connected heterogeneous information systems and computing devices, the intelligent coordination and provision of relevant added-value information at any time, anywhere is of key importance to a va- ety of applications. This challenge is envisioned to be coped with by means of appropriate intelligent and cooperative information agents. An information agent is a computational software entity that has access to one or multiple heterogeneous and geographically dispersed data and infor- tion sources. It pro-actively searches for and maintains information on behalf of its human users, or other agents preferably just in time. In other words, it is managing and overcoming the di?culties associated with information overload in open, pervasive information and service landscapes. Each component of a modern cooperative information system is represented by an appropriate intelligent information agent capable of resolving system and semantic heterogeneities in a given context on demand. Cooperative infor- tion agents are supposed to accomplish both individual and shared joint goals depending on the actual user preferences in line with given or deduced limits of time, budget and resources available.
Conceptual Modelling in Information Systems Engineering
Conceptual modeling has always been one of the cornerstones for information systems engineering as it describes the general knowledge of the system in the so-called conceptual schema.It contiant data modeling, goal-oriented modeling, agent-oriented modeling, and process-oriented modeling. Overall, the contributions reflect the most important developments and application areas of conceptual modeling in recent years, and they also pinpoint trends in conceptual modeling for the next decade.
Computing and Combinatorics ; 13th Annual International Conference, COCOON 2007, Banff, Canada, July 16-19, 2007, Proceedings
The Book covers most aspects of theoretical computer scienceand combinatorics related to computing.It exploring research, development, and novel applications of computing and combinatorics.
Computer-Aided Highway Engineering
Aimed at developing professional knowledge in the field of highway engineering with adequate skills in planning, designing and implementation of the highway project with an exposure of hands on training of computer software in designing the worldwide road infrastructures. It discusses Digital Terrain Model (DTM) using satellite data including highway geometric, pavement and tunnel design, supported by relevant tutorials. Quantity estimation, cost estimation and production of various types of construction drawings are described in detail with theory and tutorials backed by real project data. Recognizes the role of information and computer technology in various aspects of highway design. Reviews different tasks for feasibility studies and DPR with software applications. Explores topographic survey, Digital Terrain Model (DTM) and highway geometrics and, pavement and drainage design. Discusses project estimations for various revisions of the engineering work. Includes HEADS Pro along with chapter wise tutorials containing design and field data, tutorial guides and various tutorial videos.
Computational Science -- ICCS 2005 ; Vol. 3515 ; 5th International Conference, Atlanta, GA, USA, May 22-25, 2005, Proceedings, Part I
This book constitutes the refereed proceedings of the Fifth International Conference on Computational Science (ICCS 2005) held in Atlanta, Georgia, USA, 2005, Computational science is rapidly maturing as a mainstream discipline. It is central to an ever-expanding variety of ?elds in which computational methods and tools enable new discoveries with greater accuracy and speed. The primary objectives of this conference were to discuss problems and solutions in allareas,toidentifynewissues,toshapefuturedirectionsofresearch,andtohelp users apply various advanced computational techniques. The event highlighted recent developments in algorithms, computational kernels, next generation c- puting systems, tools, advanced numerical methods, data-driven systems, and emerging application ?elds, such as complex systems, ?nance, bioinformatics, computational aspects of wireless and mobile networks, graphics, and hybrid computation.
Computational Life Sciences ; Vol. 4216 ; 2nd International Symposium, CompLife 2006, Cambridge, UK, September 27-29, 2006, Proceedings
This book constitutes the refereed proceedings of the Second International Symposium on Computational Life Sciences, CompLife 2006. The papers are organized in topical sections on genomics, data mining, molecular simulation, molecular informatics, systems biology, biological networks/metabolism, and computational neuroscience.
Computational Life Sciences ; Vol. 3695 ; 1st International Symposium, CompLife 2005, Konstanz, Germany, September 25-27, 2005, Proceedings
This book constitutes the refereed proceedings of the First International Symposium on Computational Life Sciences, CompLife 2005, held in Konstanz, Germany in September 2005. The integration of knowledge in the life sciences is continuing apace with ev- increasingimportancebeing placedoncomputer-basedmethodsofdata capture, analysis, and knowledge representation. Today, our many di?erent sciences are providing us with a sea of information: it is the handling of this in?ux that is becoming a key discovery and regulatory question. The solutions to these problems will result in advancements to all of the involved sciences and will be highly in?uential both in the selection of the areas scientists seek to investigate and also on their success. For this to happen, it is crucial to establish an open and lively exchange between computer scientists, biologists, and chemists. To encourage precisely this type of exchange, crossing the borders of the sciences, we organized the 1st Symposium on Computational Life Science in Konstanz, Germany(September 25 27,2005).
Computational intelligence and security ; Vol. 3801 ; International Conference, CIS 2005, Xi'an, China, December 15-19, 2005, Proceedings, Part I
The two volume set LNAI 3801 and LNAI 3802 constitute the refereed proceedings of the annual International Conference on Computational Intelligence and Security, CIS 2005, held in Xi'an, China, in December 2005. The 338 revised papers presented - 254 regular and 84 extended papers - were carefully reviewed and selected from over 1800 submissions. The first volume is organized in topical sections on learning and fuzzy systems, evolutionary computation, intelligent agents and systems, intelligent information retrieval, support vector machines, swarm intelligence, data mining, pattern recognition, and applications.
Computational genome analysis : An introduction
Computational Genome Analysis: An Introduction presents the foundations of key problems in computational molecular biology and bioinformatics. It focuses on computational and statistical principles applied to genomes, and introduces the mathematics and statistics that are crucial for understanding these applications. The book is appropriate for a one-semester course for advanced undergraduate or beginning graduate students, and it can also introduce computational biology to computer scientists, mathematicians, or biologists who are extending their interests into this exciting field.
Lateral Alignment of Epitaxial Quantum Dots
Accurate positioning of self-organized nanostructures on a substrate surface can be regarded as the Achilles’ heel of nanotechnology. This perception also applies to self-assembled semiconductor quantum dots. This book describes the full range of possible strategies to laterally align self-assembled quantum dots on a substrate surface, starting from pure self-ordering mechanisms and culminating with forced alignment by lithographic positioning. The text addresses both short- and long-range ordering phenomena and paves the way for the future high integration of single quantum dot devices on a single chip. Contributions by the best-known experts in this field ensure that all relevant quantum-dot heterostructures are elucidated from diverse relevant perspectives.
Large-Scale Scientific Computing ; 6th International Conference, LSSC 2007, Sozopol, Bulgaria, June 5-9, 2007. Revised Papers
The 6th International Conference on Large-Scale Scienti?c Computations (LSSC 2007) was held in Sozopol, Bulgaria, June 5–9, 2007. The conference was organized by the Institute for Parallel Processing at the Bulgarian Academy of Sciences in cooperation with SIAM (Society for Industrial and Applied Ma- ematics). Partial support was also provided from project BIS-21++ funded by the European Commission in FP6 INCO via grant 016639/2005. The conference was devoted to the 60th anniversary of Richard E. Professor Ewing is internati- ally well known with his contributions in applied mathematics, mathematical modeling, and large-scale scientific computations.
Knowledge Discovery and Emergent Complexity in Bioinformatics ; 1st International Workshop, KDECB 2006, Ghent, Belgium, May 10, 2006, Revised Selected Papers
Contains selected and revised papers of the International Symposium on Knowledge Discovery and Emergent Complexity in Bioinformatics (KDECB 2006), held at the University of Ghent, Belgium, May 10, 2006.
Comparative genomics ; Vol.4205 ; RECOMB 2006 International Workshop, RECOMB-CG 2006, Montreal, Canada, September 24-26, 2006, Proceedings
The papers address a broad variety of aspects and components of the field of comparative genomics, ranging from new quantitative discoveries about genome structure and process to theorems on the complexity of computational problems inspired by genome comparison.
Comparative genomics ; Vol. 3388 : RECOMB 2004 International Workshop, RCG 2004, Bertinoro, Italy, October 16-19, 2004, Revised Selected Papers
This papers investigates the problem of conservation of combinatorial structures in genome rearrangement scenarios. We give a characterization of a class of scenarios that conserve all common intervals, called commuting scenarios, and a characterization of permutations for which commuting scenarios exist. We show that measuring conservation of common intervals can be useful tool in assessing the quality of rearrangement scenarios, by investigating in detail three specific scenarios involving the mouse, rat and human X chromosomes.
Circular RNAs
Guide readers through circular RNA purification, in silico characterization, circRNA detection, sequence validation, quantification , techniques related to gain- and loss-of-function approaches, circular RNA synthesis, split ligation, engineering, nanoparticle packaging, RNA modifications on circular RNA biogenesis, RNA translation potential, and vaccines based on circular RNAs.
Building an Enterprise Architecture Practice : Tools, Tips, Best Practices, Ready-to-Use Insights
This book clearly describes how to establish an architecture practice that delivers value for an organization. The authors demonstrate a wealth of experience and a deep understanding of the multifaceted nature of this challenging task and they provide sound advice on how to avoid the many pitfalls that may be encountered along the way. Building an Enterprise Architecture Practice provides practical advice on how to develop your enterprise architecture practice.
Bio-informatique moléculaire : Une approche algorithmique = Molecular bioinformatics : An algorithmic approach
Deals with genetic maps, from the problem of sequence comparison and alignment, including DNA chips and genomic rearrangement. It thus covers a wide variety of topics relating to algorithmic and combinatorial processing of questions arising from molecular bioinformatics and biotechnology.
