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Java for Bioinformatics and Biomedical Applications
Illustrates how individual bioinformatics applications (such as BLAST and Genscan) can be stitched together into a pipeline so that users can direct the output of one tool (for example, gene predictions using Genscan) to perform further analysis (say, homology searching using BLAST).
Logging in Java with the JDK 1.4 Logging API and Apache log4j
In development scenarios where things can't be run in a debugger, or when you run the risk of masking the problem, logs are the greatest source of information about running a program. Pro Apache Log4j, Second Edition provides best practices guidelines and comprehensive coverage of the most recent release. Step by step, the book explains core concepts, from basic to advanced. Code samples are in Java and include guidelines for different application-specific needs. You'll also learn how to extend the API to write custom components and best practices for using the feature-rich log4j API. This book concludes with enterprise Java applications using log4j with JSP and J2EE.
JDBC Recipes : A Problem-Solution Approach
JDBC Recipes provides easy-to-implement, usable solutions to problems in relational databases that use JDBC. You will be able to integrate these solutions into your web-based applications, such as Java servlets, JavaServer Pages, and Java server-side frameworks. This handy book allows you to cut and paste the solutions without any code changes. This book focuses on topics that have been ignored in most other JDBC books, such as database and result set metadata. It will help you develop database solutions, like adapters, connectors, and frameworks using Java/JDBC. The insightful solutions will enable you to handle all data types, including large binary objects. A unique feature of the book is that it presents JDBC solutions (result sets) in XML.
Beginning JSP, JSF, and Tomcat Web Development : From novice to professional
Beginning JSP™, JSF™, and Tomcat™ Web Development is all you need to develop dynamic web applications using JSP, connect to databases with JSF, and put them into action using the world’s most popular open source Java web server, Apache Tomcat.
Beginning Java EE 5 : From novice to professional
Sun's new lightweight Java Enterprise Edition (EE) 5 is an extremely powerful platform for developing enterprise-level Java-based applications, primarily for the server. This book shows you how to harness that power, examining how the pieces of the new Java EE 5 platform fit together, including the redesigned annotations-driven EJB 3 spec as well as JavaServer Faces (JSF), integrated into the platform for the first time. Hands-on tutorials are also included, along with clear explanations and working code examples. You will grow to take the next step—from writing client-side desktop applications to writing enterprise applications. You will also learn how to use the individual APIs and tools in the Java EE 5 platform, and how to merge these to create your own enterprise applications.
An Introduction to Network Programming with Java
This book provides an overview of Java … . Each chapter is supplemented with practical programming exercises.The combination of code templates with good supporting discussions allows a competent Java programmer to rapidly expand his or her skill base to include network programming.
