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An Introduction to Formal Languages and Automata
Designed for an introductory course on formal languages, automata, compatibility, and related matters forming what is known as the theory of computation
An introduction to description logics
Designed so that domain knowledge can be described and so that computers can reason about this knowledge. DLs have recently gained increased importance since they form the logical basis of widely used ontology languages, in particular the web ontology language OWL. Written by four renowned experts, this is the first textbook on description logics. It is suitable for self-study by graduates and as the basis for a university course. Starting from a basic DL, the book introduces the reader to their syntax, semantics, reasoning problems and model theory and discusses the computational complexity of these reasoning problems and algorithms to solve them.
Algorithms in Invariant Theory
The book of Sturmfels is both an easy-to-read textbook for invariant theory and a challenging research monograph that introduces a new approach to the algorithmic side of invariant theory. The Groebner bases method is the main tool by which the central problems in invariant theory become amenable to algorithmic solutions.
Algorithms in Bioinformatics ; Vol.4175 : 6th International Workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006, Proceedings
This book constitutes the refereed proceedings of the 6th International Workshop on Algorithms in Bioinformatics, WABI 2006, held in Zurich, Switzerland in September 2006 in the course of the ALGO 2006 conference meetings. The 36 revised full papers presented were carefully reviewed and selected from 100 submissions. All current issues of algorithms in bioinformatics are addressed, ranging from mathematical tools to experimental studies of approximation algorithms and reports on significant computational analyses. Numerous biological problems are dealt with, including genetic mapping, sequence alignment and sequence analysis, phylogeny, comparative genomics, and protein structure. For the first time also machine-learning approaches along with combinatorial optimization are covered.
Algorithms in Bioinformatics ; Vol. 3692 ; 5th international workshop, WABI 2005, Mallorca, Spain, October 3-6, 2005, Proceedings
this book present the proceedings of the 5th Workshop on Algorithmsin Bioinformatics (WABI 2005) which took place in Spain, 2005. The Workshop on Algorithms in Bioinformatics highlights research workspecifically developed to address algorithmic problems in biosequence analysis. The emphasis is therefore on statistical and probabilistic algorithms that addressimportant problems in the field of molecular and structural biology. the workshop aims to present recent research results, includingsignificant work in progress, and to identify and explore directions of futureresearch.Original research papers (including significant work in progress) or state-of-the-art surveys were solicited on all aspects of algorithms in bioinformatics,including, but not limited to: exact and approximate algorithms for genomics,genetics, sequence analysis, gene and signal recognition, alignment, molecularevolution, phylogenetics, structure determination or prediction, gene expressionand gene networks, proteomics, functional genomics, and drug design.
Algorithms in Bioinformatics ; 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008. Proceedings
This book constitutes the refereed proceedings of the 8th International Workshop on Algorithms in Bioinformatics, WABI 2008, held in Karlsruhe, Germany, in September 2008 as part of the ALGO 2008 meeting.
Algorithms in Bioinformatics ; 7th International Workshop, WABI 2007, Philadelphia, PA, USA, September 8-9, 2007, Proceedings
All current issues of algorithms in bioinformatics are addressed, ranging from mathematical tools to experimental studies of approximation algorithms and reports on significant computational analyses. Numerous biological problems are dealt with, including genetic mapping, sequence alignment and sequence analysis, phylogeny, comparative genomics, and protein structure. Furthermore the papers feature high-performance computing approaches to computationally hard learning and optimization problems in bioinformatics and cover methods, software and dataset repositories for development and testing of such algorithms and their underlying models.
Algorithms in Bioinformatics : Theory and Implementation
Explores a comprehensive and insightful treatment of the practical application of bioinformatic algorithms in a variety of fields. Delivers a fulsome treatment of some of the main algorithms used to explain biological functions and relationships. It introduces readers to the art of algorithms in a practical manner which is linked with biological theory and interpretation. The book covers many key areas of bioinformatics, including global and local sequence alignment, forced alignment, detection of motifs, Sequence logos, Markov chains or information entropy. Other novel approaches are also described, such as Self-Sequence alignment, Objective Digital Stains (ODSs) or Spectral Forecast and the Discrete Probability Detector (DPD) algorithm. Readers will also benefit from the inclusion of: A detailed presentation of new methods, such as Self-sequence alignment, Objective Digital Stains and Spectral Forecast ; A treatment of sequence alignment, including local sequence alignment, global sequence alignment and forced sequence alignment with full implementations ; Discussions of position-specific weight matrices, including the count, weight, relative frequencies, and log-likelihoods matrices ; A detailed presentation of the methods related to Markov Chains as well as a description of their implementation in Bioinformatics and adjacent fields ; An examination of information and entropy, including sequence logos and explanations related to their meaning ; A chapter on philosophical transactions that allows the reader a broader view of the prediction process ; Extensive worked examples with detailed case studies that point out the meaning of different results
Algorithms for Sensor and Ad Hoc Networks : Advanced Lectures
Thousands of mini computers (comparable to a stick of chewing gum in size), equipped with sensors, are deployed in some terrain or other. After activation the sensors form a self-organized network and provide data, for example about a forthcoming earthquake. The trend towards wireless communication increasingly affects electronic devices in almost every sphere of life. Conventional wireless networks rely on infrastructure such as base stations; mobile devices interact with these base stations in a client/server fashion. In contrast, current research is focusing on networks that are completely unstructured, but are nevertheless able to communicate (via several hops) with each other, despite the low coverage of their antennas. Such systems are called sensor or ad hoc networks, depending on the point of view and the application. Wireless ad hoc and sensor networks have gained an incredible research momentum. Computer scientists and engineers of all flavors are embracing the area. Sensor networks have been adopted by researchers in many fields: from hardware technology to operating systems, from antenna design to databases, from information theory to networking, from graph theory to computational geometry.
Algorithms and Programming : Problems and Solutions
This book containing classical and well-known problems supplemented by clear and in-depth explanations. The material covered includes such topics as combinatorics, sorting, searching, queues, grammar and parsing, selected well-known algorithms and much more.
Algorithms and Models for the Web-Graph ; 5th International Workshop, WAW 2007, San Diego, CA, USA, December 11-12, 2007, Proceedings
The book address a wide variety of topics related to the study of the Web-graph such as random graph models for the Web-graph, PageRank analysis and computation, decentralized search, local partitioning algorithms,and traceroute sampling. The Web-graph has been the focal point of a tremendous amount of research for more than a decade. The view of the Web as a graph has great practical importance and has also generated much interesting theoretical work.
Algorithms and Models for the Web-Graph ; 4th International Workshop, WAW 2006, Banff, Canada, November 30 - December 1, 2006. Revised Papers
his book constitutes the revised papers of the Fourth International Workshop on Algorithms and Models for the Web-Graph, WAW 2006, held in Banff, Canada, November 30 - December 1, 2006.
Algorithms and data structures ; 9th international workshop, WADS 2005, Waterloo, Canada, August 15-17, 2005, Proceedings
The papers in this volume were presented at the 9th Workshop on Algorithmsand Data Structures (WADS 2005). at the University of Waterloo, Waterloo, Canada. The workshopalternates with the Scandinavian Workshop on Algorithm Theory (SWAT), con-tinuing the tradition of SWAT and WADS starting with SWAT 1988 and WADS1989. From 90 submissions, the Program Committee selected 37 papers for pre-sentation at the workshop. includ Algorithm Analysis and Problem Complexity Data Structures Discrete Mathematics in Computer Science Computer Graphics Numeric Computing
Algorithms and data structures ; 10th International Workshop, WADS 2007, Halifax, Canada, August 15-17, 2007, Proceedings
The book present research on the theory and application of algorithms and data structures in all areas, including combinatorics, computational geometry, databases, graphics, parallel and distributed computing.
Algorithms and computation ; Vol. 4288: 17th International symposium, ISAAC 2006, Kolkata, India, December 18-20, 2006, Proceedings
This book constitutes the refereed proceedings of the 17th International Symposium on Algorithms and Computation, ISAAC 2006, held in Kolkata, India in December 2006. The 73 revised full papers presented were carefully reviewed and selected from 255 submissions. The papers are organized in topical sections on algorithms and data structures, online algorithms, approximation algorithm, graphs, computational geometry, computational complexity, network, optimization and biology, combinatorial optimization and quantum computing, as well as distributed computing and cryptography.
Algorithms and computation ; Vol. 3827 ; 16th International symposium, ISAAC 2005, Sanya, Hainan, China, December 19-21, 2005, Proceedings
This book constitutes the refereed proceedings of the 16th International Symposium on Algorithms and Computation, ISAAC 2005, held in China in 2005. The 112 revised full papers presented were carefully reviewed and selected from 549 submissions. The papers are organized in topical sections on computational geometry, computational optimization, graph drawing and graph algorithms, computational complexity, approximation algorithms, internet algorithms, quantum computing and cryptography, data structure, computational biology, experimental algorithm mehodologies and online algorithms, randomized algorithms, parallel and distributed algorithms, graph drawing and graph algorithms, computational complexity, combinatorial optimization, computational biology, computational complexity, computational optimization, computational geometry, approximation algorithms, graph drawing and graph algorithms, computational geometry, approximation algorithms, graph drawing and graph algorithms, and data structure.
Algorithms and computation ; 19th International symposium, ISAAC 2008, Gold Coast, Australia, December 15-17, 2008. Proceedings
This book constitutes the refereed proceedings of the 19th International Symposium on Algorithms and Computation, ISAAC 2008, held in Gold Coast, Australia in December 2008.
Algorithms and computation ; 18th International symposium, ISAAC 2007, Sendai, Japan, December 17-19, 2007, Proceedings
This book presented algorithms and data structures, online algorithms, approximation algorithm, graphs, computational geometry, computational complexity, network, optimization and biology, combinatorial optimization and quantum computing, as well as distributed computing and cryptography.
Algorithms and computation ; 15th international symposium, ISAAC 2004, Hong Kong, China, December 20-22, 2004, Proceedings
This volume contains the proceedings of the 15th Annual International Sym- sium on Algorithms and Computation (ISAAC 2004), held in Hong Kong, 2004. ISAAC is an annual international symposium that covers a wide range of topics,namelyalgorithmsandcomputation. aftar review process the committee selected 76 papers, the decisions being based on originality and relevance to the ?eld of algorithms and computation.
Algorithms and Complexity ; 6th Italian Conference, CIAC 2006, Rome, Italy, May 29-31, 2006, Proceedings
Here are the refereed proceedings of the 6th Italian Conference on Algorithms and Computation, CIAC 2006. The 33 revised full papers presented together with 3 invited papers address such topics as sequential, parallel and distributed algorithms, data structures, approximation algorithms, randomized algorithms, on-line algorithms, graph algorithms, analysis of algorithms, algorithm engineering, algorithmic game theory, computational biology, computational complexity, communication networks, computational geometry, cryptography, discrete optimization, graph drawing, mathematical programming, and quantum algorithms.
